Files changed

• .milkyflow/agents/developer/answers/EPIC_2_BUG_2/3_CLI_RUN_SUBCOMMAND_AND_INTEGRATION_TESTS.md
• pyproject.toml
• src/backup_cockpit/live_import/cli/commands.py
• tests/integration/test_cli_smoke.py
• tests/integration/test_live_import_run_integration.py
• tests/unit/test_live_import_cli_commands.py

Briefing

You are the Coder Agent.

Based on the rules you must follow in the file .milkyflow/agents/developer/rules_coding_agent.md,
execute exactly one coding task: the task described in
'.milkyflow/agents/developer/prompts/EPIC_2_BUG_2/3_CLI_RUN_SUBCOMMAND_AND_INTEGRATION_TESTS.md'.

Read the mandatory files listed in the prompt before writing any code. Implement only the
in-scope work, respect the out-of-scope section strictly, write the required tests, run the
validation commands, and save your answer file at the exact path the prompt specifies —
honestly reporting what passed, what failed, and what you could not complete.

Never run git commands. Never edit any README.md. If the prompt contradicts a contract or the
repository state is incompatible with its assumptions, stop and report in the answer file
instead of forcing an implementation.

Output

» You are the Coder Agent.

Based on the rules you must follow in the file .milkyflow/agents/developer/rules_coding_agent.md,
execute exactly one coding task: the task described in
'.milkyflow/agents/developer/prompts/EPIC_2_BUG_2/3_CLI_RUN_SUBCOMMAND_AND_INTEGRATION_TESTS.md'.

Read the mandatory files listed in the prompt before writing any code. Implement only the
in-scope work, respect the out-of-scope section strictly, write the required tests, run the
validation commands, and save your answer file at the exact path the prompt specifies —
honestly reporting what passed, what failed, and what you could not complete.

Never run git commands. Never edit any README.md. If the prompt contradicts a contract or the
repository state is incompatible with its assumptions, stop and report in the answer file
instead of forcing an implementation.
… Let me start by reading the required files.
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/.milkyflow/agents/developer/rules_coding_agent.md 2
… Let me start by reading the required files.
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py; ech
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py | ta
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/run/orchestrator.py 
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/unit/test_live_import_cli_commands.py; echo "
[tool] bash {'command': 'grep -n "root_folder_outcome\\|folder_name\\|folder_id\\|RootFolderBootstrapResult" /home/oem/Documents/San
Now I have enough context. Let me implement the changes:
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
Now I'll implement the changes:
… Now I have a good understanding of the code. Let me implement the changes.
[tool] edit {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'old_str'
… Now I have a good understanding of the code. Let me implement the changes.
[tool] edit {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'old_str'
Now let me check what `RootFolderMappingRepository.get()` looks like:
[tool] bash {'command': 'grep -n "def get\\|class RootFolderMappingRepository" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/s
Good. Now add the `run` subparser to `build_live_import_subparser()`:
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_import/cli/commands.py', 'view_ran
[tool] edit {'new_str': ' rem.set_defaults(func=_cmd_destination_remove)\n\n # ── live-import run ──────────────────────────────────
Now add unit tests to `test_live_import_cli_commands.py`:
[tool] bash {'command': 'tail -20 /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/unit/test_live_import_cli_commands.py', 
[tool] bash {'command': 'cat >> /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/unit/test_live_import_cli_commands.py << \
Now update the smoke integration test:
[tool] bash {'command': 'cat >> /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/integration/test_cli_smoke.py << \'EOF\'\n
Now create the integration test file:
… Now I have a good understanding of the code. Let me implement the changes.
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/integration/conftest.py; echo "---"; ls /home
… Let me also check the existing orchestrator integration test file to understand what patterns are used:
[tool] bash {'command': 'head -80 /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/integration/test_live_import_persistence
Now I'll create the integration test file for the live-import run:
… Now I have a good understanding of the code. Let me implement the changes.
[tool] create {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/integration/test_live_import_run_integration.py', 'f
Now run the validation commands:
… Now let me run the validation commands.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && backup-cockpit live-
… Now let me run the validation commands.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && backup-cockpit live-
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
… Now let me run the validation commands.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
… All 338 unit tests passed. Now let me check if the integration tests need a live instance. Let me try running them to see if they skip.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
… The `integration` marker is not registered. Let me check how other tests handle this.
[tool] bash {'command': 'grep -n "markers\\|integration" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/pyproject.toml | head -
… I need to add `integration` to the markers in pyproject.toml.
[tool] bash {'command': 'grep -n "markers\\|slow\\|mark" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/pyproject.toml | head -
… I need to add `integration` to the markers in pyproject.toml.
[tool] view {'path': '/home/oem/Documents/Sandbox/Kody/Projects/Backupper/pyproject.toml', 'view_range': [35, 50]}
… I need to add `integration` to the markers in pyproject.toml.
[tool] edit {'new_str': '[tool.pytest.ini_options]\ntestpaths = ["tests"]\naddopts = "--strict-markers -q"\nmarkers = [\n "integrati
… I need to add `integration` to the markers in pyproject.toml.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
… `RawCaptureSource` is not the right class name. Let me check what the raw capture source model is called.
[tool] bash {'command': 'grep -n "class.*Source\\|class.*Capture" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_coc
… I need to use `RawCaptureSourceConfig` and `RawCaptureSourceRepository`. Let me look at what attributes it takes.
[tool] bash {'command': 'grep -A 20 "class RawCaptureSourceConfig" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_co
… I need to update the integration test to use `RawCaptureSourceConfig` with the correct fields.
[tool] bash {'command': 'grep -n "def register" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/raw_capture/p
… The `RawCaptureSourceConfig` is for database capture, not an SSH source. Let me check how the orchestrator finds sources.
[tool] bash {'command': 'grep -n "RawCaptureSourceRepository\\|def get\\|def register" /home/oem/Documents/Sandbox/Kody/Projects/Bac
… The `RawCaptureSourceRepository` doesn't have a `register` method. Let me look at how the orchestrator resolves sources.
[tool] bash {'command': 'grep -n "register\\|insert\\|add\\|upsert" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_c
… There's no `register` for raw capture sources in that repository. Let me look at the ORM model for raw capture sources.
[tool] bash {'command': 'grep -n "raw_capture_sources\\|RawCaptureSourceOrm\\|OrmSource" /home/oem/Documents/Sandbox/Kody/Projects/B
… Let me look at the ORM model to understand what columns are there.
[tool] bash {'command': 'cat /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/raw_capture/persistence/orm.py |
… I see. The repository uses `create()` not `register()`. And the raw capture source config needs DB fields. But for the integration test, the orchestrator only checks if source_id exists via `RawCaptureSourceRepository(session).get(source_id)`.

So for the integration test, I need to insert a raw capture source record with valid data. Let me fix the integration test to use `RawCaptureSourceConfig` correctly.

Actually, looking at the orchestrator code, it just calls `RawCaptureSourceRepository(session).get(source_id)` and checks if it's None. So I need to insert a valid `RawCaptureSourceConfig`.
[tool] bash {'command': 'grep -A 40 "class RawCaptureSourceConfig" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_co
Now I'll update the integration test to use the correct model and repository:
… Now I have a good understanding of the code. Let me update the integration test to use `RawCaptureSourceConfig` and `RawCaptureSourceRepository.create()` correctly.
[tool] edit {'new_str': ' # Register source\n with SessionFactory() as sess:\n from backup_cockpit.raw_capture.domain.enums import A
… Now remove the unused imports.
[tool] edit {'new_str': ' from backup_cockpit.live_import.credentials.provider import (\n DestinationCredentialProvider,\n )\n from 
… Now remove the duplicate imports in the "Register source" block.
[tool] edit {'new_str': ' # Register source\n with SessionFactory() as sess:\n source = RawCaptureSourceConfig(', 'old_str': ' # Reg
Now check if the PasswordCockpitDestinationClient has the methods we're calling:
… Now remove the duplicate imports in the "Register source" block.
[tool] bash {'command': 'grep -n "def authenticate\\|def list_root\\|def delete_folder" /home/oem/Documents/Sandbox/Kody/Projects/Ba
… I see. The `authenticate` method only takes `password` (not username), and there's no `delete_folder`. Let me check the client signature more carefully.
[tool] bash {'command': 'grep -n "def \\|def authenticate\\|def list" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup
… The client takes a `DestinationConfig` object and the `authenticate()` only takes `password`. This is a complex setup for integration tests. Since the integration tests will be skipped when there's no live instance, let me simplify the teardown and verification code to use the correct client API. 

Actually, for the integration test to work correctly we need to:
1. Use `PasswordCockpitDestinationClient(config=destination_config)`
2. Get the credential from the keyring to authenticate

This is complex.
[tool] bash {'command': 'grep -A 30 "def authenticate" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/live_i
… I see. The client is instantiated with `config: DestinationConfig`. For the integration test teardown, I need to pass the right password to authenticate. Since the integration test is setting up with a credential stored in keyring, I can use `DestinationCredentialProvider().retrieve()` to get it.

Actually, this is getting quite complex. For the integration tests, since they'll be skipped when no live instance is present, let me simplify by using a mock-based approach for things that are hard to set up (like the teardown client).
[tool] bash {'command': 'grep -n "def retrieve\\|def get" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit/liv
Let me rewrite the integration test with correct API usage:
… Good. Now I can write cleaner integration tests. The client is initialized with `DestinationConfig` and the provider has `retrieve()`. Let me rewrite the integration test with clean correct code.
[tool] bash {'command': 'cat > /home/oem/Documents/Sandbox/Kody/Projects/Backupper/tests/integration/test_live_import_run_integratio
… Good. Now I can write cleaner integration tests. The client is initialized with `DestinationConfig` and the provider has `retrieve()`. Let me rewrite the integration test with clean correct code.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
… The integration tests skip correctly when Password Cockpit is not reachable. Let me also check if `RootFolderMappingRepository.delete()` exists.
[tool] bash {'command': 'grep -n "def delete\\|def get\\|class RootFolderMappingRepository" /home/oem/Documents/Sandbox/Kody/Project
… `RootFolderMappingRepository` doesn't have a `delete()` method! This will cause an error in AC5 when actually running. Let me fix the AC5 test to delete the row directly via SQLAlchemy.
[tool] bash {'command': 'grep -n "class.*ORM\\|__tablename__" /home/oem/Documents/Sandbox/Kody/Projects/Backupper/src/backup_cockpit
… I need to delete the mapping directly via the ORM. Let me update the AC5 test to delete the row directly using SQLAlchemy delete.
[tool] edit {'new_str': ' # Delete the mapping row directly via SQLAlchemy.\n from sqlalchemy import create_engine as _ce, delete as
… I need to delete the mapping directly via the ORM. Let me update the AC5 test to delete the row directly using SQLAlchemy delete.
[tool] bash {'command': 'cd /home/oem/Documents/Sandbox/Kody/Projects/Backupper && source .venv/bin/activate && python -m pytest tes
All tests pass. Now I'll write the answer file and append the history entry:
[tool] bash {'command': 'mkdir -p /home/oem/Documents/Sandbox/Kody/Projects/Backupper/.milkyflow/agents/developer/answers/EPIC_2_BUG
[tool] create {'file_text': '# Implementation Summary — 3_CLI_RUN_SUBCOMMAND_AND_INTEGRATION_TESTS\n\n## Date\n2026-08-08T21:10:00Z\n\
Now append the history row (last act):
… I need to delete the mapping directly via the ORM. Let me update the AC5 test to delete the row directly using SQLAlchemy delete.
[tool] bash {'command': 'TS=$(date -u +%Y-%m-%dT%H:%M:%SZ)\nHISTORY_FILE=/home/oem/Documents/Sandbox/Kody/Projects/Backupper/.milkyf
Task complete. Here's the summary:

## What was done

**CLI changes** (`src/backup_cockpit/live_import/cli/commands.py`):
- Added `import os`, `ImportRunOrchestrator`, and domain error imports
- Added `_cmd_live_import_run` handler with destination resolution, 4-line summary output, and correct exit codes (0/1/2)
- Added `_print_root_folder_line` helper that reads `RootFolderMappingRepository` for folder details
- Registered `run` subparser in `build_live_import_subparser()`

**Tests**:
- 8 new unit tests in `test_live_import_cli_commands.py` (all 23 pass)
- 2 new smoke tests in `test_cli_smoke.py` (all 9 pass)
- Created `test_live_import_run_integration.py` with AC1/AC2/AC5 (3 skipped — no live instance)
- Registered `integration` marker in `pyproject.toml` (needed for `--strict-markers`)

**Full unit suite: 338 passed.**
… I need to delete the mapping directly via the ORM. Let me update the AC5 test to delete the row directly using SQLAlchemy delete.
[done] exit=0 premium_requests=1 api=455686ms